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ppp3ca.L protein phosphatase 3, catalytic subunit, alpha isozyme L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447196, updated on 17-Aug-2024

Summary

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Official Symbol
ppp3ca.L
Official Full Name
protein phosphatase 3, catalytic subunit, alpha isozyme L homeolog
Primary source
Xenbase:XB-GENE-952303
Locus tag
XELAEV_18005728mg
See related
EnsemblRapid:ENSXLAG00005010034
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
caln; ccn1; cna1; calna; ppp2b; calna1; ppp3ca; calcineurin
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Genomic context

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Location:
chromosome: 1L
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (78616624..78747354)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (67752991..67883127)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene NACHT, LRR and PYD domains-containing protein 3 like L homeolog Neighboring gene B-cell scaffold protein with ankyrin repeats Neighboring gene DNA damage inducible transcript 4 like L homeolog Neighboring gene alcohol dehydrogenase 1C (class I), gamma polypeptide L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Role for non-proteolytic control of M-phase-promoting factor activity at M-phase exit. D'Angiolella V, et al. PLoS One, 2007 Feb 28. PMID 17327911, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Clone Names

  • MGC79144

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables calcium-dependent protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
  
enables calmodulin-dependent protein phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables myosin phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within calcineurin-mediated signaling IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
protein phosphatase 3, catalytic subunit, alpha isozyme L homeolog
Names
calcineurin A alpha
NP_001087372.1
XP_041437123.1
XP_041437124.1
XP_041437126.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093903.1 → NP_001087372.1  protein phosphatase 3, catalytic subunit, alpha isozyme L homeolog

    See identical proteins and their annotated locations for NP_001087372.1

    Status: PROVISIONAL

    Source sequence(s)
    BC079683
    UniProtKB/TrEMBL
    A0A974DYK5, Q6AXB0, Q9DEF7
    Related
    ENSXLAP00005029695.1, ENSXLAT00005030441.1
    Conserved Domains (2) summary
    smart00156
    Location:58 → 329
    PP2Ac; Protein phosphatase 2A homologues, catalytic domain
    cd07416
    Location:41 → 345
    MPP_PP2B; PP2B, metallophosphatase domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    78616624..78747354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041581189.1 → XP_041437123.1  protein phosphatase 3, catalytic subunit, alpha isozyme L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8HV39, A0A974DXI6, O57438
    Conserved Domains (1) summary
    cd07416
    Location:41 → 345
    MPP_PP2B; PP2B, metallophosphatase domain

  2. XM_041581190.1 → XP_041437124.1  protein phosphatase 3, catalytic subunit, alpha isozyme L homeolog isoform X2

    UniProtKB/TrEMBL
    A0A1L8HV42, A0A974DXU9, O57438
    Conserved Domains (1) summary
    cd07416
    Location:41 → 345
    MPP_PP2B; PP2B, metallophosphatase domain

  3. XM_041581192.1 → XP_041437126.1  protein phosphatase 3, catalytic subunit, alpha isozyme L homeolog isoform X3

    UniProtKB/TrEMBL
    A0A1L8HV05, A0A974DZU4, Q9DEF7
    Conserved Domains (1) summary
    cd07416
    Location:41 → 345
    MPP_PP2B; PP2B, metallophosphatase domain
Nucleotide Protein Strain
Heading Accession and Version

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