rph3al.L rabphilin 3A like (without C2 domains) L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: rph3al.L
Official Full Name: rabphilin 3A like (without C2 domains) L homeolog
Primary source: Xenbase:XB-GENE-17330674
Locus tag: XELAEV_180127291mg
See related: EnsemblRapid:ENSXLAG00005004920 AllianceGenome:Xenbase:XB-GENE-17330674
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: rph3al
Summary: Predicted to enable metal ion binding activity and small GTPase binding activity. Predicted to act upstream of or within exocytosis and intracellular protein transport. Orthologous to human RPH3AL (rabphilin 3A like (without C2 domains)). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 2L

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2L	NC_054373.1 (99890651..99912687, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2L	NC_030726.1 (94147446..94169482, complement)

Chromosome 2L - NC_054373.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables small GTPase binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within exocytosis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within intracellular protein transport	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: rabphilin 3A like (without C2 domains) L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093893.1 → NP_001087362.1 rabphilin 3A like (without C2 domains) L homeolog

See identical proteins and their annotated locations for NP_001087362.1

Status: PROVISIONAL

Source sequence(s)

BC078618

UniProtKB/TrEMBL

Q66KN5

Related

ENSXLAP00005014667.1, ENSXLAT00005014863.1

Conserved Domains (1) summary

cl22851
Location:45 → 120

PHD_SF; PHD finger superfamily

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

99890651..99912687 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)