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rnf182.L ring finger protein 182 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447184, updated on 18-Sep-2024

Summary

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Official Symbol
rnf182.L
Official Full Name
ring finger protein 182 L homeolog
Primary source
Xenbase:XB-GENE-1009196
Locus tag
XELAEV_18031679mg
See related
EnsemblRapid:ENSXLAG00005018221
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
rnf182
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Genomic context

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See rnf182.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (97345070..97372198, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (90584846..90612202, complement)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene regulator of G-protein signaling 9-binding protein B L homeolog Neighboring gene mitochondrial calcium uniporter regulator 1 L homeolog Neighboring gene jumonji and AT-rich interaction domain containing 2 L homeolog Neighboring gene dystrobrevin binding protein 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC85578

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ring finger protein 182 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093892.2 → NP_001087361.1  ring finger protein 182 L homeolog

    See identical proteins and their annotated locations for NP_001087361.1

    Status: PROVISIONAL

    Source sequence(s)
    BC078617
    UniProtKB/TrEMBL
    Q66KN6
    Related
    ENSXLAP00005053805.1, ENSXLAT00005054979.1
    Conserved Domains (1) summary
    pfam14634
    Location:21 → 70
    zf-RING_5; zinc-RING finger domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    97345070..97372198 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018266586.2 → XP_018122075.1  ring finger protein 182 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8FY26, A0A974CNG1
    Related
    ENSXLAP00005053788.1, ENSXLAT00005054962.1
    Conserved Domains (1) summary
    cd16555
    Location:21 → 71
    RING-HC_RNF182; RING finger, HC subclass, found in RING finger protein 182 (RNF182) and similar proteins

  2. XM_041565503.1 → XP_041421437.1  ring finger protein 182 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8FY26, A0A974CNG1
    Related
    ENSXLAP00005053756.1, ENSXLAT00005054930.1
    Conserved Domains (1) summary
    cd16555
    Location:21 → 71
    RING-HC_RNF182; RING finger, HC subclass, found in RING finger protein 182 (RNF182) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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