utp11.L UTP11, small subunit processome component L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: utp11.L
Official Full Name: UTP11, small subunit processome component L homeolog
Primary source: Xenbase:XB-GENE-992340
Locus tag: XELAEV_18012046mg
See related: EnsemblRapid:ENSXLAG00005031106 AllianceGenome:Xenbase:XB-GENE-992340
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: cgi94; cgi-94; utp11l; utp11l.L
Summary: Predicted to act upstream of or within rRNA processing. Predicted to be located in nucleolus. Predicted to be part of small-subunit processome. Orthologous to human UTP11 (UTP11 small subunit processome component). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 2L

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2L	NC_054373.1 (59020395..59030681, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2L	NC_030726.1 (56550582..56560862, complement)

Chromosome 2L - NC_054373.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within rRNA processing	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleolus	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info
part_of small-subunit processome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: UTP11, small subunit processome component L homeolog

Names: UTP11, small subunit processome component homolog L homeolog; UTP11-like, U3 small nucleolar ribonucleoprotein L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093872.2 → NP_001087341.1 UTP11, small subunit processome component L homeolog

See identical proteins and their annotated locations for NP_001087341.1

Status: PROVISIONAL

Source sequence(s)

BC078583

UniProtKB/TrEMBL

A0A974DN02, Q66KR8

Related

ENSXLAP00005093131.1, ENSXLAT00005094814.1

Conserved Domains (1) summary

pfam03998
Location:13 → 253

Utp11; Utp11 protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

59020395..59030681 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)