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cox17.S cytochrome c oxidase copper chaperone COX17 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447142, updated on 4-Nov-2024

Summary

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Official Symbol
cox17.S
Official Full Name
cytochrome c oxidase copper chaperone COX17 S homeolog
Primary source
Xenbase:XB-GENE-958798
Locus tag
XELAEV_18014460mg
See related
EnsemblRapid:ENSXLAG00005034272 AllianceGenome:Xenbase:XB-GENE-958798
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cox17; cox17b; cox17-b
Summary
Predicted to enable copper chaperone activity and copper ion binding activity. Predicted to act upstream of or within mitochondrial cytochrome c oxidase assembly. Predicted to be located in mitochondrial intermembrane space. Orthologous to human COX17 (cytochrome c oxidase copper chaperone COX17). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See cox17.S in Genome Data Viewer
Location:
chromosome: 2S
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (28878024..28904624, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (28590999..28597107, complement)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase-like Neighboring gene popeye domain cAMP effector 2 S homeolog Neighboring gene uncharacterized LOC121400430 Neighboring gene nuclear receptor subfamily 1 group I member 2 S homeolog Neighboring gene glycogen synthase kinase 3 beta S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC85413

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables copper chaperone activity IEA
Inferred from Electronic Annotation
more info
  
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within mitochondrial cytochrome c oxidase assembly IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrial intermembrane space IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
COX17 homolog, cytochrome c oxidase assembly protein b
Names
COX17 cytochrome c oxidase assembly homolog b
COX17 cytochrome c oxidase copper chaperone
COX17, cytochrome c oxidase copper chaperone S homeolog
cytochrome c oxidase assembly homolog 17

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093850.2 → NP_001087319.1  COX17 homolog, cytochrome c oxidase assembly protein b

    See identical proteins and their annotated locations for NP_001087319.1

    Status: PROVISIONAL

    Source sequence(s)
    BC078552
    UniProtKB/TrEMBL
    A0A974DI55, Q66KU8
    Related
    ENSXLAP00005102356.1, ENSXLAT00005104351.1
    Conserved Domains (1) summary
    pfam05051
    Location:20 → 65
    COX17; Cytochrome C oxidase copper chaperone (COX17)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    28878024..28904624 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041583180.1 → XP_041439114.1  COX17 homolog, cytochrome c oxidase assembly protein b isoform X1

    UniProtKB/TrEMBL
    A0A8J1MBN4
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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