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hacd2.L 3-hydroxyacyl-CoA dehydratase 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447050, updated on 17-Aug-2024

Summary

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Official Symbol
hacd2.L
Official Full Name
3-hydroxyacyl-CoA dehydratase 2 L homeolog
Primary source
Xenbase:XB-GENE-17334498
Locus tag
XELAEV_18044331mg
See related
EnsemblRapid:ENSXLAG00005015786
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ptplb
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Genomic context

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See hacd2.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (55853309..55860433)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (45305337..45312009)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene extended synaptotagmin protein 3 L homeolog Neighboring gene centrosomal protein 70kDa L homeolog Neighboring gene Fas apoptotic inhibitory molecule L homeolog Neighboring gene poly(ADP-ribose) polymerase family member 9 L homeolog Neighboring gene deltex E3 ubiquitin ligase 3L L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC83576

General protein information

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Preferred Names
3-hydroxyacyl-CoA dehydratase 2 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093692.1 → NP_001087161.1  3-hydroxyacyl-CoA dehydratase 2 L homeolog

    See identical proteins and their annotated locations for NP_001087161.1

    Status: PROVISIONAL

    Source sequence(s)
    BC078103
    UniProtKB/TrEMBL
    A0A974BYJ1, Q6DCE4
    Related
    ENSXLAP00005046398.1, ENSXLAT00005047502.1
    Conserved Domains (1) summary
    pfam04387
    Location:74 → 232
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    55853309..55860433
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041575671.1 → XP_041431605.1  3-hydroxyacyl-CoA dehydratase 2 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1LS93
    Related
    ENSXLAP00005046409.1, ENSXLAT00005047513.1
    Conserved Domains (1) summary
    cl02156
    Location:28 → 236
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  2. XM_018234476.2 → XP_018089965.1  3-hydroxyacyl-CoA dehydratase 2 L homeolog isoform X2

    UniProtKB/TrEMBL
    A0A974BYJ1, Q6DCE4

  3. XM_018234477.2 → XP_018089966.1  3-hydroxyacyl-CoA dehydratase 2 L homeolog isoform X2

    UniProtKB/TrEMBL
    A0A974BYJ1, Q6DCE4
    Related
    ENSXLAP00005046404.1, ENSXLAT00005047508.1
Nucleotide Protein Strain
Heading Accession and Version

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