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rad51ap1.L RAD51 associated protein 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 446940, updated on 18-Sep-2024

Summary

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Official Symbol
rad51ap1.L
Official Full Name
RAD51 associated protein 1 L homeolog
Primary source
Xenbase:XB-GENE-963256
Locus tag
XELAEV_18039282mg
See related
EnsemblRapid:ENSXLAG00005020967
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
pir51; rad51ap1
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Genomic context

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See rad51ap1.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (68942884..68953546)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (55444752..55455563)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 14A L homeolog Neighboring gene serine peptidase inhibitor, Kunitz type, 2 L homeolog Neighboring gene uncharacterized LOC108698600 Neighboring gene uncharacterized LOC108698601 Neighboring gene chromosome 8 C19orf33 homolog L homeolog Neighboring gene Yip1 interacting factor homolog B, membrane trafficking protein L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC132063

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
RAD51 associated protein 1 L homeolog; RAD51-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    68942884..68953546
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018230209.2 → XP_018085698.1  RAD51-associated protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A1L8F8S6, A0A974H807, Q2TAH4
    Related
    ENSXLAP00005061562.1, ENSXLAT00005063015.1

  2. XM_041572927.1 → XP_041428861.1  RAD51-associated protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8J1LHP0, Q2TAH4

  3. XM_018230208.2 → XP_018085697.1  RAD51-associated protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A1L8F8T4, A0A974C8E7, Q2TAH4
    Related
    ENSXLAP00005061572.1, ENSXLAT00005063025.1
Nucleotide Protein Strain
Heading Accession and Version

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