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LOC446916 troponin T, cardiac muscle isoforms [ Xenopus laevis (African clawed frog) ]

Gene ID: 446916, updated on 18-Aug-2023

Summary

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Gene symbol
LOC446916
Gene description
troponin T, cardiac muscle isoforms
Locus tag
XELAEV_18012281mg
See related
EnsemblRapid:ENSXLAG00005029664
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See LOC446916 in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (72398262..72494752, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (67023035..67119775, complement)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121399973 Neighboring gene calcium channel, voltage-dependent, L type, alpha 1S subunit L homeolog Neighboring gene plakophilin 1 L homeolog Neighboring gene uncharacterized LOC121399974 Neighboring gene cysteine and glycine rich protein 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
troponin T, cardiac muscle; troponin T, cardiac muscle isoforms

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    72398262..72494752 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018246542.2 → XP_018102031.1  troponin T, cardiac muscle isoforms isoform X2

    UniProtKB/TrEMBL
    A0A8J0UDG5, Q804V5
    Related
    ENSXLAP00005088939.1, ENSXLAT00005090608.1

  2. XM_018246541.2 → XP_018102030.1  troponin T, cardiac muscle isoforms isoform X1

    UniProtKB/TrEMBL
    Q3B8A3, Q804V5
    Related
    ENSXLAP00005088764.1, ENSXLAT00005090433.1

  3. XM_041582032.1 → XP_041437966.1  troponin T, cardiac muscle isoform X3

    UniProtKB/TrEMBL
    A0A8J1M9D7
    Related
    ENSXLAP00005088615.1, ENSXLAT00005090284.1
    Conserved Domains (1) summary
    PTZ00266
    Location:63 → 167
    PTZ00266; NIMA-related protein kinase; Provisional
Nucleotide Protein Strain
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