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ppp4r1.S protein phosphatase 4 regulatory subunit 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 446904, updated on 4-Nov-2024

Summary

Official Symbol
ppp4r1.S
Official Full Name
protein phosphatase 4 regulatory subunit 1 S homeolog
Primary source
Xenbase:XB-GENE-945308
Locus tag
XELAEV_18033591mg
See related
EnsemblRapid:ENSXLAG00005016720 AllianceGenome:Xenbase:XB-GENE-945308
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ppp4r1
Summary
Predicted to enable protein phosphatase regulator activity. Predicted to act upstream of or within protein dephosphorylation. Orthologous to human PPP4R1 (protein phosphatase 4 regulatory subunit 1). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information
Annotation category: partial on reference assembly
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Genomic context

See ppp4r1.S in Genome Data Viewer
Location:
chromosome: 6S
Exon count:
20
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6S NC_054382.1 (90979026..91010795)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6S NC_030735.1 (82653627..82685656)

Chromosome 6S - NC_054382.1Genomic Context describing neighboring genes Neighboring gene RAB31, member RAS oncogene family S homeolog Neighboring gene extended synaptotagmin-1-like Neighboring gene ralA binding protein 1 S homeolog Neighboring gene twisted gastrulation BMP signaling modulator 1 S homeolog

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
protein phosphatase 4 regulatory subunit 1 S homeolog
Names
protein phosphatase 4, regulatory subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093600.1NP_001087069.1  protein phosphatase 4 regulatory subunit 1 S homeolog

    See identical proteins and their annotated locations for NP_001087069.1

    Status: PROVISIONAL

    Source sequence(s)
    BC077982
    UniProtKB/TrEMBL
    A0A974CLX2, Q6DCM5
    Related
    ENSXLAP00005049212.1, ENSXLAT00005050349.1
    Conserved Domains (1) summary
    sd00044
    Location:133157
    HEAT; HEAT repeat [structural motif]

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054382.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    90979026..91010795
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)