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hpcal1.L hippocalcin-like 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 446902, updated on 17-Aug-2024

Summary

Official Symbol
hpcal1.L
Official Full Name
hippocalcin-like 1 L homeolog
Primary source
Xenbase:XB-GENE-6254872
Locus tag
XELAEV_18028042mg
See related
EnsemblRapid:ENSXLAG00005023769
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
hpcal1
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Genomic context

Location:
chromosome: 5L
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (149293573..149387543)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (138220745..138314770)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene ribonucleotide reductase M2, gene 2 L homeolog Neighboring gene ribonucleotide reductase M2, gene 1 L homeolog Neighboring gene ornithine decarboxylase 1 L homeolog Neighboring gene nucleolar protein 10 L homeolog

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093598.1NP_001087067.1  hippocalcin-like protein 1

    See identical proteins and their annotated locations for NP_001087067.1

    Status: PROVISIONAL

    Source sequence(s)
    BC077976
    UniProtKB/Swiss-Prot
    Q6DCM9
    UniProtKB/TrEMBL
    A0A974HK63
    Related
    ENSXLAP00005070377.1, ENSXLAT00005071917.1
    Conserved Domains (1) summary
    COG5126
    Location:13179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    149293573..149387543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018261978.2XP_018117467.1  hippocalcin-like protein 1 isoform X1

    UniProtKB/Swiss-Prot
    Q6DCM9
    UniProtKB/TrEMBL
    A0A974HK63
    Conserved Domains (1) summary
    COG5126
    Location:13179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]