fbxl20.L F-box and leucine-rich repeat protein 20 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: fbxl20.L
Official Full Name: F-box and leucine-rich repeat protein 20 L homeolog
Primary source: Xenbase:XB-GENE-979490
Locus tag: XELAEV_18043176mg
See related: EnsemblRapid:ENSXLAG00005026041 AllianceGenome:Xenbase:XB-GENE-979490
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: fbl20; fbxl20; scrapper
Summary: Predicted to act upstream of or within SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm. Predicted to be part of SCF ubiquitin ligase complex. Orthologous to human FBXL20 (F-box and leucine rich repeat protein 20). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 9_10L

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	9_10L	NC_054387.1 (2421292..2435500)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	9_10L	NC_030740.1 (2385680..2400597)

Chromosome 9_10L - NC_054387.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of SCF ubiquitin ligase complex	IEA Inferred from Electronic Annotation more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: F-box and leucine-rich repeat protein 20 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093596.1 → NP_001087065.1 F-box and leucine-rich repeat protein 20 L homeolog

See identical proteins and their annotated locations for NP_001087065.1

Status: PROVISIONAL

Source sequence(s)

BC077969

UniProtKB/TrEMBL

A0A974BWF5, Q6DCN6

Related

ENSXLAP00005077673.1, ENSXLAT00005079264.1

Conserved Domains (3) summary

cd09293
Location:170 → 371

AMN1; Antagonist of mitotic exit network protein 1

sd00034
Location:119 → 144

LRR_AMN1; leucine-rich repeat [structural motif]

pfam12937
Location:28 → 70

F-box-like; F-box-like