ccdc124.S coiled-coil domain containing 124 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: ccdc124.S
Official Full Name: coiled-coil domain containing 124 S homeolog
Primary source: Xenbase:XB-GENE-6255345
Locus tag: XELAEV_18001180mg
See related: EnsemblRapid:ENSXLAG00005025879 AllianceGenome:Xenbase:XB-GENE-6255345
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: ccdc124; ccdc124-a; ccdc124-b
Summary: Predicted to enable transcription coactivator activity. Predicted to act upstream of or within transcription by RNA polymerase II. Predicted to be located in several cellular components, including centrosome; midbody; and nucleus. Orthologous to human CCDC124 (coiled-coil domain containing 124). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 1S

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1S	NC_054372.1 (102110945..102146426, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	Unplaced Scaffold	NW_016694812.1 (2609410..2645114)

Chromosome 1S - NC_054372.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables transcription coactivator activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in centrosome	IEA Inferred from Electronic Annotation more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info
located_in midbody	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: coiled-coil domain-containing protein 124-B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093480.1 → NP_001086949.1 coiled-coil domain-containing protein 124-B

See identical proteins and their annotated locations for NP_001086949.1

Status: PROVISIONAL

Source sequence(s)

BC077812

UniProtKB/Swiss-Prot

Q6DD17

Related

ENSXLAP00005076907.1, ENSXLAT00005078498.1

Conserved Domains (1) summary

pfam06244
Location:96 → 209

DUF1014; Protein of unknown function (DUF1014)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

102110945..102146426 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)