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rnf121.S ring finger protein 121 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 446774, updated on 17-Aug-2024

Summary

Official Symbol
rnf121.S
Official Full Name
ring finger protein 121 S homeolog
Primary source
Xenbase:XB-GENE-17334924
Locus tag
XELAEV_18032706mg
See related
EnsemblRapid:ENSXLAG00005024137
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
rnf121
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Genomic context

Location:
chromosome: 6S
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6S NC_054382.1 (2689348..2710462)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6S NC_030735.1 (2271637..2291523)

Chromosome 6S - NC_054382.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108719650 Neighboring gene uncharacterized LOC108695534 Neighboring gene zinc finger protein 569 S homeolog Neighboring gene uncharacterized XB22065625 S homeolog Neighboring gene retinoic acid receptor responder protein 2-like

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC80406

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
E3 ubiquitin ligase Rnf121; RING finger protein 121
NP_001086939.1
XP_018124218.1
XP_018124219.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093470.1NP_001086939.1  E3 ubiquitin ligase Rnf121

    See identical proteins and their annotated locations for NP_001086939.1

    Status: PROVISIONAL

    Source sequence(s)
    BC077797
    UniProtKB/Swiss-Prot
    Q6DD32
    UniProtKB/TrEMBL
    A0A974HDB0
    Related
    ENSXLAP00005071723.1, ENSXLAT00005073270.1
    Conserved Domains (1) summary
    pfam13639
    Location:226276
    zf-RING_2; Ring finger domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054382.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    2689348..2710462
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018268729.2XP_018124218.1  RING finger protein 121 isoform X1

    UniProtKB/Swiss-Prot
    Q6DD32
    UniProtKB/TrEMBL
    A0A974HDB0
    Related
    ENSXLAP00005071753.1, ENSXLAT00005073300.1
  2. XM_018268730.2XP_018124219.1  RING finger protein 121 isoform X1

    UniProtKB/Swiss-Prot
    Q6DD32
    UniProtKB/TrEMBL
    A0A974HDB0
    Related
    ENSXLAP00005071614.1, ENSXLAT00005073161.1