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emx1.S empty spiracles homeobox 1, S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 446734, updated on 17-Aug-2024

Summary

Official Symbol
emx1.S
Official Full Name
empty spiracles homeobox 1, S homeolog
Primary source
Xenbase:XB-GENE-6466041
Locus tag
XELAEV_18008731mg
See related
EnsemblRapid:ENSXLAG00005000577
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
emx1; XEmx1; emx1.2; emx1.2.S
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Genomic context

See emx1.S in Genome Data Viewer
Location:
chromosome: 1S
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (2683386..2698672)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (2552384..2567820)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121399256 Neighboring gene uncharacterized LOC108704058 Neighboring gene sideroflexin-5-like Neighboring gene sideroflexin-5

Genomic regions, transcripts, and products

General protein information

Preferred Names
empty spiracles homeobox 1, S homeolog
Names
empty spiracles homeobox 1, gene 2 S homeolog
empty spiracles homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093430.1NP_001086899.1  empty spiracles homeobox 1, S homeolog

    See identical proteins and their annotated locations for NP_001086899.1

    Status: PROVISIONAL

    Source sequence(s)
    BC077629
    UniProtKB/TrEMBL
    Q6AZM1
    Conserved Domains (1) summary
    pfam00046
    Location:146199
    Homeobox; Homeobox domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    2683386..2698672
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018237554.2XP_018093043.1  empty spiracles homeobox 1, S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8HKA3, A0A974HZS3
    Related
    ENSXLAP00005001569.1, ENSXLAT00005001609.1