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zfand2a.L zinc finger, AN1-type domain 2A L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 446668, updated on 4-Nov-2024

Summary

Official Symbol
zfand2a.L
Official Full Name
zinc finger, AN1-type domain 2A L homeolog
Primary source
Xenbase:XB-GENE-6078914
Locus tag
XELAEV_18045247mg
See related
EnsemblRapid:ENSXLAG00005014613 AllianceGenome:Xenbase:XB-GENE-6078914
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
zfand2a
Summary
Predicted to enable zinc ion binding activity. Predicted to act upstream of or within proteasome-mediated ubiquitin-dependent protein catabolic process and protein targeting to ER. Predicted to be located in endoplasmic reticulum. Orthologous to human ZFAND2A (zinc finger AN1-type containing 2A). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See zfand2a.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (107009541..107021834)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (96473217..96485589)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene MICAL-like 2 L homeolog Neighboring gene homeobox protein unc-4 homolog Neighboring gene uncharacterized LOC108701563 Neighboring gene interleukin 4 receptor L homeolog

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC83152

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
zinc finger, AN1-type domain 2A L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093364.1NP_001086833.1  zinc finger, AN1-type domain 2A L homeolog

    See identical proteins and their annotated locations for NP_001086833.1

    Status: PROVISIONAL

    Source sequence(s)
    BC077523
    UniProtKB/TrEMBL
    A0A974C0M8, Q6DDM8
    Related
    ENSXLAP00005042770.1, ENSXLAT00005043837.1
    Conserved Domains (1) summary
    pfam01428
    Location:100135
    zf-AN1; AN1-like Zinc finger

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    107009541..107021834
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)