arrdc1.S arrestin domain containing 1 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: arrdc1.S
Official Full Name: arrestin domain containing 1 S homeolog
Primary source: Xenbase:XB-GENE-865601
Locus tag: XELAEV_18041486mg
See related: EnsemblRapid:ENSXLAG00005009459
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: arrdc1
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 8S

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	8S	NC_054386.1 (27802167..27814279)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	8S	NC_030739.1 (27681465..27693582)

Chromosome 8S - NC_054386.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables ubiquitin protein ligase binding	IEA Inferred from Electronic Annotation more info
enables ubiquitin-like ligase-substrate adaptor activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within protein transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within visual perception	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: arrestin domain containing 1 S homeolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093349.1 → NP_001086818.1 arrestin domain containing 1 S homeolog

See identical proteins and their annotated locations for NP_001086818.1

Status: PROVISIONAL

Source sequence(s)

BC077501

UniProtKB/TrEMBL

A0A974C2H7, Q6AZP4

Related

ENSXLAP00005027605.1, ENSXLAT00005028339.1

Conserved Domains (2) summary

pfam02752
Location:162 → 283

Arrestin_C; Arrestin (or S-antigen), C-terminal domain

cl22903
Location:7 → 139

Arrestin_N; Arrestin (or S-antigen), N-terminal domain