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MGC82578 MGC82578 protein [ Xenopus laevis (African clawed frog) ]

Gene ID: 446648, updated on 18-Aug-2023

Summary

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Gene symbol
MGC82578
Gene description
MGC82578 protein
Locus tag
XELAEV_18019100mg
See related
EnsemblRapid:ENSXLAG00005002022
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See MGC82578 in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (150424623..150430847)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (133524201..133530425)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene calcium channel, voltage-dependent, P/Q type, alpha 1A subunit L homeolog Neighboring gene uncharacterized LOC121401644 Neighboring gene golgin subfamily A member 6-like protein 22 Neighboring gene YJU2 splicing factor homolog B L homeolog Neighboring gene general transcription factor IIF subunit 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
Surfeit locus protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093344.1 → NP_001086813.1  Surfeit locus protein 4

    See identical proteins and their annotated locations for NP_001086813.1

    Status: PROVISIONAL

    Source sequence(s)
    BC077490
    UniProtKB/TrEMBL
    A0A974HUA2, Q6AZP7
    Related
    ENSXLAP00005006086.1, ENSXLAT00005006192.1
    Conserved Domains (1) summary
    pfam02077
    Location:6 → 269
    SURF4; SURF4 family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    150424623..150430847
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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