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fam199x.S family with sequence similarity 199, X-linked S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 446575, updated on 6-Oct-2023

Summary

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Official Symbol
fam199x.S
Official Full Name
family with sequence similarity 199, X-linked S homeolog
Primary source
Xenbase:XB-GENE-6255928
Locus tag
XELAEV_18042204mg
See related
EnsemblRapid:ENSXLAG00005014448
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
fam199x; fam199x-a; fam199x-b
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Genomic context

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See fam199x.S in Genome Data Viewer
Location:
chromosome: 8S
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8S NC_054386.1 (67831233..67841050, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8S NC_030739.1 (65544888..65554705, complement)

Chromosome 8S - NC_054386.1Genomic Context describing neighboring genes Neighboring gene interleukin 1 receptor accessory protein like 2 S homeolog Neighboring gene uncharacterized LOC121397676 Neighboring gene homeobox protein ARX Neighboring gene uncharacterized LOC496342 Neighboring gene LON peptidase N-terminal domain and ring finger 3 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC81610

General protein information

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Preferred Names
protein FAM199X-B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093271.1 → NP_001086740.1  protein FAM199X-B

    See identical proteins and their annotated locations for NP_001086740.1

    Status: PROVISIONAL

    Source sequence(s)
    BC077378
    UniProtKB/Swiss-Prot
    Q6DDX3
    UniProtKB/TrEMBL
    A0A974C3M3, A0A974C6G6
    Related
    ENSXLAP00005042278.1, ENSXLAT00005043345.1
    Conserved Domains (1) summary
    pfam15814
    Location:57 → 377
    FAM199X; Protein family FAM199X

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054386.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    67831233..67841050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6DDX3.1 GenPept UniProtKB/Swiss-Prot:Q6DDX3

Gene LinkOut

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