snn.L stannin L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: snn.L
Official Full Name: stannin L homeolog
Primary source: Xenbase:XB-GENE-6255932
Locus tag: XELAEV_18045146mg
See related: EnsemblRapid:ENSXLAG00005027226 AllianceGenome:Xenbase:XB-GENE-6255932
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: snn; snna; snn-a; snn-b
Summary: Predicted to be located in mitochondrial outer membrane. Orthologous to human SNN (stannin). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 9_10L

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	9_10L	NC_054387.1 (99786843..99798618)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	9_10L	NC_030740.1 (89206755..89218530)

Chromosome 9_10L - NC_054387.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrial outer membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: stannin L homeolog

Names: stannin a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093255.1 → NP_001086724.1 stannin L homeolog

See identical proteins and their annotated locations for NP_001086724.1

Status: PROVISIONAL

Source sequence(s)

BC077355

UniProtKB/TrEMBL

A0A974C064, Q6DDZ5

Related

ENSXLAP00005080908.1, ENSXLAT00005082516.1

Conserved Domains (3) summary

pfam09049
Location:2 → 33

SNN_transmemb; Stannin transmembrane

pfam09050
Location:34 → 59

SNN_linker; Stannin unstructured linker

pfam09051
Location:61 → 86

SNN_cytoplasm; Stannin cytoplasmic