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jakmip1.S janus kinase and microtubule interacting protein 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 446544, updated on 4-Nov-2024

Summary

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Official Symbol
jakmip1.S
Official Full Name
janus kinase and microtubule interacting protein 1 S homeolog
Primary source
Xenbase:XB-GENE-17335600
Locus tag
XELAEV_18008919mg
See related
EnsemblRapid:ENSXLAG00005022464 AllianceGenome:Xenbase:XB-GENE-17335600
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Orthologous to human JAKMIP1 (janus kinase and microtubule interacting protein 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See jakmip1.S in Genome Data Viewer
Location:
chromosome: 1S
Exon count:
23
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (16401304..16496137)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (16279370..16318124)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 2 regulatory subunit B, gamma S homeolog Neighboring gene Wolfram syndrome 1 (wolframin) S homeolog Neighboring gene collapsin response mediator protein 1 S homeolog Neighboring gene ellis-van Creveld syndrome protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC80343

General protein information

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Preferred Names
janus kinase and microtubule interacting protein 1 S homeolog; janus kinase and microtubule-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    16401304..16496137
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041579400.1 → XP_041435334.1  janus kinase and microtubule-interacting protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8J1M0X2
    Related
    ENSXLAP00005066172.1, ENSXLAT00005067697.1
    Conserved Domains (1) summary
    COG1196
    Location:24 → 802
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_041579401.1 → XP_041435335.1  janus kinase and microtubule-interacting protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A1L8HKT1, A0A974HZY1, A0A974I0G3
    Related
    ENSXLAP00005066113.1, ENSXLAT00005067636.1
    Conserved Domains (2) summary
    PTZ00121
    Location:85 → 331
    PTZ00121; MAEBL; Provisional
    pfam16034
    Location:462 → 651
    JAKMIP_CC3; JAKMIP CC3 domain

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001093240.1: Suppressed sequence

    Description
    NM_001093240.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein Strain
Heading Accession and Version

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