depdc7.L DEP domain containing 7 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: depdc7.L
Official Full Name: DEP domain containing 7 L homeolog
Primary source: Xenbase:XB-GENE-1010073
Locus tag: XELAEV_18021963mg
See related: EnsemblRapid:ENSXLAG00005019685
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: tr2; depdc7; depdc7a; depdc7-a; depdc7-b
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Genomic context

Location:: chromosome: 4L

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	4L	NC_054377.1 (13292648..13312561, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	4L	NC_030730.1 (12767079..12787030, complement)

Chromosome 4L - NC_054377.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within intracellular signal transduction	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: DEP domain-containing protein 7

Names: DEP domain-containing protein 7 a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093234.1 → NP_001086703.1 DEP domain-containing protein 7

See identical proteins and their annotated locations for NP_001086703.1

Status: PROVISIONAL

Source sequence(s)

BC077330

UniProtKB/Swiss-Prot

Q6AZT6

UniProtKB/TrEMBL

A0A974HMT5

Related

ENSXLAP00005057806.1, ENSXLAT00005059160.1

Conserved Domains (2) summary

cd04405
Location:197 → 431

RhoGAP_BRCC3-like; RhoGAP_BRCC3-like: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of BRCC3-like proteins. This subgroup also contains two groups of closely related proteins, BRCC3 and DEPDC7, which both contain a C-terminal RhoGAP-like domain ...

cd04446
Location:39 → 135

DEP_DEPDC4; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC4-like proteins. DEPDC4 is a DEP domain containing protein of unknown function.

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

13292648..13312561 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)