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MGC80058 MGC80058 protein [ Xenopus laevis (African clawed frog) ]

Gene ID: 446501, updated on 18-Aug-2023

Summary

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Gene symbol
MGC80058
Gene description
MGC80058 protein
Locus tag
XELAEV_18024667mg
See related
EnsemblRapid:ENSXLAG00005004483
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See MGC80058 in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (23723886..23729635)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (23060684..23066433)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol glycan anchor biosynthesis class U protein Neighboring gene 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1-like Neighboring gene serine/threonine-protein kinase N2-like Neighboring gene serine/threonine-protein kinase N2-like Neighboring gene tyrosine-protein phosphatase non-receptor type 5 Neighboring gene cysteinyl-tRNA synthetase 1 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC446501

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093197.1 → NP_001086666.1  uncharacterized protein LOC446501

    See identical proteins and their annotated locations for NP_001086666.1

    Status: PREDICTED

    Source sequence(s)
    BC077279
    UniProtKB/TrEMBL
    A0A974D0X5, Q6DE63
    Related
    ENSXLAP00005013416.1, ENSXLAT00005013598.1
    Conserved Domains (1) summary
    pfam07947
    Location:37 → 224
    YhhN; YhhN-like protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    23723886..23729635
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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