zup1.S zinc finger containing ubiquitin peptidase 1 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: zup1.S
Official Full Name: zinc finger containing ubiquitin peptidase 1 S homeolog
Primary source: Xenbase:XB-GENE-968381
Locus tag: XELAEV_18029237mg
See related: EnsemblRapid:ENSXLAG00005002429
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: zufsp; zufsp.S; c6orf113
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Genomic context

Location:: chromosome: 5S

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	5S	NC_054380.1 (57148115..57165745, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	5S	NC_030733.1 (57107260..57125258)

Chromosome 5S - NC_054380.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables hydrolase activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: zinc finger containing ubiquitin peptidase 1 S homeolog

Names: zinc finger with UFM1-specific peptidase domain S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093121.1 → NP_001086590.1 zinc finger containing ubiquitin peptidase 1 S homeolog

See identical proteins and their annotated locations for NP_001086590.1

Status: PROVISIONAL

Source sequence(s)

BC076846

UniProtKB/TrEMBL

A0A974CTL0, Q6DF95

Related

ENSXLAP00005007298.1, ENSXLAT00005007407.1

Conserved Domains (1) summary

pfam07910
Location:360 → 577

Peptidase_C78; Peptidase family C78

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054380.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

57148115..57165745 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)