armc1.L armadillo repeat containing 1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: armc1.L
Official Full Name: armadillo repeat containing 1 L homeolog
Primary source: Xenbase:XB-GENE-864943
Locus tag: XELAEV_18032071mg
See related: EnsemblRapid:ENSXLAG00005016937 AllianceGenome:Xenbase:XB-GENE-864943
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: armc1
Summary: Predicted to enable metal ion binding activity. Predicted to be located in mitochondrial outer membrane. Is expressed in ectoderm; endoderm; liver and biliary system; nervous system; and visual system. Orthologous to human ARMC1 (armadillo repeat containing 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 6L

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	6L	NC_054381.1 (126617353..126646950, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	6L	NC_030734.1 (119491176..119517690, complement)

Chromosome 6L - NC_054381.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in mitochondrial outer membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrion	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: armadillo repeat containing 1 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093093.1 → NP_001086562.1 armadillo repeat containing 1 L homeolog

See identical proteins and their annotated locations for NP_001086562.1

Status: PROVISIONAL

Source sequence(s)

BC076810

UniProtKB/TrEMBL

Q6DFC9

Conserved Domains (2) summary

cd00020
Location:8 → 103

ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...

sd00043
Location:27 → 59

ARM; armadillo repeat [structural motif]

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

126617353..126646950 complement

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GenBank, FASTA, Sequence Viewer (Graphics)