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tmem209.L transmembrane protein 209 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 446396, updated on 4-Nov-2024

Summary

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Official Symbol
tmem209.L
Official Full Name
transmembrane protein 209 L homeolog
Primary source
Xenbase:XB-GENE-17346435
Locus tag
XELAEV_18017894mg
See related
EnsemblRapid:ENSXLAG00005030776 AllianceGenome:Xenbase:XB-GENE-17346435
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Predicted to be located in membrane. Orthologous to human TMEM209 (transmembrane protein 209). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See tmem209.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (92506717..92525038)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (77181599..77199986)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene carboxypeptidase A1 L homeolog Neighboring gene centrosomal protein 41kDa L homeolog Neighboring gene uncharacterized XB5937757 L homeolog Neighboring gene kelch domain containing 10 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC83764

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
transmembrane protein 209 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093092.1 → NP_001086561.1  transmembrane protein 209 L homeolog

    See identical proteins and their annotated locations for NP_001086561.1

    Status: PROVISIONAL

    Source sequence(s)
    BC076809
    UniProtKB/TrEMBL
    Q6DFD0
    Related
    ENSXLAP00005092414.1, ENSXLAT00005094097.1
    Conserved Domains (1) summary
    pfam09786
    Location:2 → 560
    CytochromB561_N; Cytochrome B561, N terminal

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    92506717..92525038
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041585113.1 → XP_041441047.1  transmembrane protein 209 L homeolog isoform X2

    UniProtKB/TrEMBL
    A0A1L8GZK3, A0A974DBZ7
    Conserved Domains (1) summary
    pfam09786
    Location:2 → 560
    CytochromB561_N; Cytochrome B561, N terminal

  2. XM_041585114.1 → XP_041441048.1  transmembrane protein 209 L homeolog isoform X2

    UniProtKB/TrEMBL
    A0A1L8GZK3, A0A974DBZ7
    Conserved Domains (1) summary
    pfam09786
    Location:2 → 560
    CytochromB561_N; Cytochrome B561, N terminal

  3. XM_018251002.2 → XP_018106491.1  transmembrane protein 209 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0UNJ4
    Related
    ENSXLAP00005092338.1, ENSXLAT00005094021.1
Nucleotide Protein Strain
Heading Accession and Version

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