pex12.L peroxisomal biogenesis factor 12 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: pex12.L
Official Full Name: peroxisomal biogenesis factor 12 L homeolog
Primary source: Xenbase:XB-GENE-6251489
Locus tag: XELAEV_18012676mg
See related: EnsemblRapid:ENSXLAG00005001743
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: pex12
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Genomic context

Location:: chromosome: 2L

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2L	NC_054373.1 (97385945..97393446, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2L	NC_030726.1 (91647484..91654985, complement)

Chromosome 2L - NC_054373.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables zinc ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within protein import into peroxisome matrix	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein ubiquitination	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in peroxisomal membrane	IEA Inferred from Electronic Annotation more info
located_in peroxisome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: peroxisome assembly protein 12-B

Names: peroxin-12-B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093042.1 → NP_001086511.1 peroxisome assembly protein 12-B

See identical proteins and their annotated locations for NP_001086511.1

Status: PROVISIONAL

Source sequence(s)

BC076735

UniProtKB/Swiss-Prot

Q6DFK1

UniProtKB/TrEMBL

A0A974DPZ3

Related

ENSXLAP00005005188.1, ENSXLAT00005005294.1

Conserved Domains (2) summary

pfam04757
Location:26 → 261

Pex2_Pex12; Pex2 / Pex12 amino terminal region

pfam13923
Location:298 → 335

zf-C3HC4_2; Zinc finger, C3HC4 type (RING finger)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

97385945..97393446 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)