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daxx.L death-associated protein 6 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 446279, updated on 17-Aug-2024

Summary

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Official Symbol
daxx.L
Official Full Name
death-associated protein 6 L homeolog
Primary source
Xenbase:XB-GENE-866217
Locus tag
XELAEV_18039132mg
See related
EnsemblRapid:ENSXLAG00005032589
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
daxx
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Genomic context

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Location:
chromosome: 8L
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (63919649..63933961, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (50736442..50750762, complement)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene TAP binding protein (tapasin) L homeolog Neighboring gene zinc finger and BTB domain containing 22 L homeolog Neighboring gene kinesin family member C1 L homeolog Neighboring gene myoferlin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Clone Names

  • MGC132065

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within apoptotic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within chromatin organization IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in PML body IEA
Inferred from Electronic Annotation
more info
  
located_in chromosome IEA
Inferred from Electronic Annotation
more info
  
located_in chromosome, centromeric region IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in intracellular organelle IEA
Inferred from Electronic Annotation
more info
  
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
death-associated protein 6 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092990.1 → NP_001086459.1  death-associated protein 6 L homeolog

    See identical proteins and their annotated locations for NP_001086459.1

    Status: PROVISIONAL

    Source sequence(s)
    BC112947
    UniProtKB/TrEMBL
    A0A974C763, Q2KHQ3
    Related
    ENSXLAP00005097677.1, ENSXLAT00005099480.1
    Conserved Domains (2) summary
    cd13150
    Location:171 → 374
    DAXX_histone_binding; Histone binding domain of the death-domain associated protein (DAXX)
    cl23986
    Location:40 → 138
    DAXX_helical_bundle; Helical bundle domain of the death-domain associated protein (DAXX)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    63919649..63933961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials