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ube2l3.S ubiquitin conjugating enzyme E2 L3 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 446231, updated on 4-Nov-2024

Summary

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Official Symbol
ube2l3.S
Official Full Name
ubiquitin conjugating enzyme E2 L3 S homeolog
Primary source
Xenbase:XB-GENE-970764
Locus tag
XELAEV_18010527mg
See related
EnsemblRapid:ENSXLAG00005011800 AllianceGenome:Xenbase:XB-GENE-970764
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ube2l3
Summary
Predicted to enable ATP binding activity and transferase activity. Orthologous to human UBE2L3 (ubiquitin conjugating enzyme E2 L3). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ube2l3.S in Genome Data Viewer
Location:
chromosome: 1S
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (142594567..142605482)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (126838497..126849298)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol 4-kinase, catalytic, alpha S homeolog Neighboring gene serpin peptidase inhibitor, clade D (heparin cofactor), member 1 S homeolog Neighboring gene hypermethylated in cancer 2 S homeolog Neighboring gene YdjC chitooligosaccharide deacetylase homolog homeolog Neighboring gene stromal cell-derived factor 2-like 1 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC114833, MGC132024

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ubiquitin conjugating enzyme E2 L3 S homeolog
Names
ubiquitin conjugating enzyme E2L 3 S homeolog
ubiquitin-conjugating enzyme E2L 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092975.1 → NP_001086444.1  ubiquitin conjugating enzyme E2 L3 S homeolog

    See identical proteins and their annotated locations for NP_001086444.1

    Status: PROVISIONAL

    Source sequence(s)
    BC108747
    UniProtKB/TrEMBL
    A0A974I225, Q4QR35, Q6AZI4
    Conserved Domains (1) summary
    smart00212
    Location:6 → 149
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic domain homologues

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    142594567..142605482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041580302.1 → XP_041436236.1  ubiquitin conjugating enzyme E2 L3 S homeolog

    UniProtKB/TrEMBL
    A0A974I225, Q4QR35, Q6AZI4
    Related
    ENSXLAP00005034469.1, ENSXLAT00005035352.1
    Conserved Domains (1) summary
    smart00212
    Location:6 → 149
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic domain homologues
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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