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fut4 alpha3-fucosyltransferase [ Takifugu rubripes (torafugu) ]

Gene ID: 445966, updated on 21-Dec-2023

Summary

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Gene symbol
fut4
Gene description
alpha3-fucosyltransferase
See related
Ensembl:ENSTRUG00000023870
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
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Genomic context

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See fut4 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 11 NC_042295.1 (9327288..9330095, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 11 NC_018900.1 (4930385..4932760, complement)

Chromosome 11 - NC_042295.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(XXVI) chain-like Neighboring gene SRP receptor subunit beta Neighboring gene cut-like homeobox 1b Neighboring gene SH2B adaptor protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha3-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001032757.1 → NP_001027929.1  alpha3-fucosyltransferase

    See identical proteins and their annotated locations for NP_001027929.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ606063
    UniProtKB/TrEMBL
    Q70AH4
    Related
    ENSTRUP00000053732.2, ENSTRUT00000058020.2
    Conserved Domains (2) summary
    pfam00852
    Location:201 → 369
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:65 → 172
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042295.1 Reference fTakRub1.2 Primary Assembly

    Range
    9327288..9330095 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029843227.1 → XP_029699087.1  alpha3-fucosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A3B5KCI0

  2. XM_011608320.2 → XP_011606622.2  alpha3-fucosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A3B5KCI0

RNA

  1. XR_003889918.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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