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XB5959486.L Novel protein containing Rieske [2Fe-2S] domain and Protein of unknown function (DUF455) domains L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 445834, updated on 4-Nov-2024

Summary

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Symbol
XB5959486.L
Full Name
Novel protein containing Rieske [2Fe-2S] domain and Protein of unknown function (DUF455) domains L homeolog
Primary source
Xenbase:XB-GENE-5959510
Locus tag
XELAEV_18018432mg
See related
EnsemblRapid:ENSXLAG00005022599 AllianceGenome:Xenbase:XB-GENE-5959510
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
LOC445834.L; LOC734029.L
Summary
Predicted to enable 2 iron, 2 sulfur cluster binding activity and metal ion binding activity. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See XB5959486.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (122797191..122809210, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (107384489..107396544, complement)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene organic solute transporter subunit beta Neighboring gene mitochondrial methionyl-tRNA formyltransferase L homeolog Neighboring gene cartilage intermediate layer protein L homeolog Neighboring gene gonadotropin releasing hormone receptor type I

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables 2 iron, 2 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein HI_0077

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    122797191..122809210 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018253285.2 → XP_018108774.1  uncharacterized protein HI_0077

    UniProtKB/TrEMBL
    A0A1L8H146, A0A974DDM1, Q6DF75
    Related
    ENSXLAP00005066496.1, ENSXLAT00005068020.1
Nucleotide Protein Strain
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