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diaph3 diaphanous-related formin 3 [ Danio rerio (zebrafish) ]

Gene ID: 445230, updated on 2-Nov-2024

Summary

Official Symbol
diaph3provided by ZNC
Official Full Name
diaphanous-related formin 3provided by ZNC
Primary source
ZFIN:ZDB-GENE-040801-144
See related
Ensembl:ENSDARG00000090785 AllianceGenome:ZFIN:ZDB-GENE-040801-144
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:100947
Summary
Predicted to enable actin binding activity and small GTPase binding activity. Predicted to be involved in actin filament polymerization. Predicted to act upstream of or within actin cytoskeleton organization. Predicted to be active in actin filament. Human ortholog(s) of this gene implicated in autosomal dominant auditory neuropathy 1. Orthologous to human DIAPH3 (diaphanous related formin 3). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See diaph3 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (31680557..31825884)
105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (31417561..31562888)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene hyccin 2 Neighboring gene zgc:162816 Neighboring gene P2X purinoceptor 7-like Neighboring gene uncharacterized LOC559910 Neighboring gene uncharacterized LOC103911846

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 
involved_in actin filament polymerization IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in actin filament IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
protein diaphanous homolog 3
Names
diaphanous homolog 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003624.1NP_001003624.1  protein diaphanous homolog 3

    See identical proteins and their annotated locations for NP_001003624.1

    Status: PROVISIONAL

    Source sequence(s)
    BC078320
    UniProtKB/TrEMBL
    Q6DBX8
    Related
    ENSDARP00000040304.4, ENSDART00000040305.6
    Conserved Domains (1) summary
    pfam06371
    Location:93233
    Drf_GBD; Diaphanous GTPase-binding Domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    31680557..31825884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)