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surf2 surfeit 2 [ Danio rerio (zebrafish) ]

Gene ID: 445173, updated on 12-Sep-2024

Summary

Official Symbol
surf2provided by ZNC
Official Full Name
surfeit 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-040801-86
See related
Ensembl:ENSDARG00000112476 AllianceGenome:ZFIN:ZDB-GENE-040801-86
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:101084
Summary
Orthologous to human SURF2 (surfeit 2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See surf2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (1205816..1218949, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (1153373..1164534, complement)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene PR domain containing 12a Neighboring gene surfeit 4 Neighboring gene bublin coiled coil protein Neighboring gene cdkn1a interacting zinc finger protein 1a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003567.2NP_001003567.1  surfeit locus protein 2

    See identical proteins and their annotated locations for NP_001003567.1

    Status: PROVISIONAL

    Source sequence(s)
    BC078276
    UniProtKB/TrEMBL
    Q6DC16
    Related
    ENSDARP00000153661.1, ENSDART00000184398.1
    Conserved Domains (1) summary
    pfam05477
    Location:5228
    SURF2; Surfeit locus protein 2 (SURF2)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    1205816..1218949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)