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EIF5A eukaryotic translation initiation factor 5A [ Bos taurus (domestic cattle) ]

Gene ID: 444990, updated on 18-Aug-2024

Summary

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Gene symbol
EIF5A
Gene description
eukaryotic translation initiation factor 5A
See related
BGD:BT28990; Ensembl:ENSBTAG00000002018
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See EIF5A in Genome Data Viewer
Location:
chromosome: 19
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (27015338..27020478)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 2 member 4 Neighboring gene Y-box binding protein 2 Neighboring gene G protein pathway suppressor 2 Neighboring gene neuralized E3 ubiquitin protein ligase 4 Neighboring gene uncharacterized LOC132343038

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular cloning of bovine eIF5A and deoxyhypusine synthase cDNA. Huang JK, et al. DNA Seq, 2004 Feb. PMID 15354351
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The deduced bovine eIF5A protein is 100% identical to human Eif5A.
    Title: Molecular cloning of bovine eIF5A and deoxyhypusine synthase cDNA.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

Clone Names

  • MGC128860

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translational termination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 5A-1
Names
eIF-4D
eIF-5A
eIF-5A-1
eIF-5A1
eukaryotic initiation factor 5A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003658.2 → NP_001003658.1  eukaryotic translation initiation factor 5A-1

    See identical proteins and their annotated locations for NP_001003658.1

    Status: PROVISIONAL

    Source sequence(s)
    BC108135
    UniProtKB/Swiss-Prot
    Q32PF5, Q6EWQ7
    UniProtKB/TrEMBL
    A0AAF6YJ88, A0AAF7AHP7
    Related
    ENSBTAP00000081787.1, ENSBTAT00000094840.1
    Conserved Domains (1) summary
    cl30809
    Location:1 → 150
    PLN03107; eukaryotic translation initiation factor 5A; Provisional

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    27015338..27020478
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015458612.3 → XP_015314098.1  eukaryotic translation initiation factor 5A-1 isoform X1

    UniProtKB/Swiss-Prot
    Q32PF5, Q6EWQ7
    UniProtKB/TrEMBL
    A0AAF6YJ88, A0AAF7AHP7
    Conserved Domains (1) summary
    cl30809
    Location:1 → 150
    PLN03107; eukaryotic translation initiation factor 5A; Provisional

  2. XM_059877785.1 → XP_059733768.1  eukaryotic translation initiation factor 5A-1 isoform X1

    UniProtKB/Swiss-Prot
    Q32PF5, Q6EWQ7
    UniProtKB/TrEMBL
    A0AAF6YJ88, A0AAF7AHP7

  3. XM_024979699.2 → XP_024835467.1  eukaryotic translation initiation factor 5A-1 isoform X1

    UniProtKB/Swiss-Prot
    Q32PF5, Q6EWQ7
    UniProtKB/TrEMBL
    A0AAF6YJ88, A0AAF7AHP7
    Conserved Domains (1) summary
    cl30809
    Location:1 → 150
    PLN03107; eukaryotic translation initiation factor 5A; Provisional

  4. XM_024979700.2 → XP_024835468.1  eukaryotic translation initiation factor 5A-1 isoform X1

    UniProtKB/Swiss-Prot
    Q32PF5, Q6EWQ7
    UniProtKB/TrEMBL
    A0AAF6YJ88, A0AAF7AHP7
    Conserved Domains (1) summary
    cl30809
    Location:1 → 150
    PLN03107; eukaryotic translation initiation factor 5A; Provisional
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6EWQ7.3 GenPept UniProtKB/Swiss-Prot:Q6EWQ7

Gene LinkOut

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