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c9_10h2orf76.L chromosome 9-10 C2orf76 homolog L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444810, updated on 17-Aug-2024

Summary

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Official Symbol
c9_10h2orf76.L
Official Full Name
chromosome 9-10 C2orf76 homolog L homeolog
Primary source
Xenbase:XB-GENE-5798608
Locus tag
XELAEV_18044322mg
See related
EnsemblRapid:ENSXLAG00005016079
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
aim29; c2orf76; c2orf76.L; c9h2orf76.L
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Genomic context

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See c9_10h2orf76.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (55707961..55729963, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (45158199..45164773, complement)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene complement C1q-like protein 2 L homeolog Neighboring gene uncharacterized LOC121397931 Neighboring gene STEAP3 metalloreductase L homeolog Neighboring gene lamina-associated polypeptide 2-like Neighboring gene transmembrane protein 37 L homeolog Neighboring gene diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) L homeolog Neighboring gene secretin receptor L homeolog Neighboring gene cilia- and flagella-associated protein 221

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC84199

General protein information

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Preferred Names
UPF0538 protein C2orf76 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092912.1 → NP_001086381.1  UPF0538 protein C2orf76 homolog

    See identical proteins and their annotated locations for NP_001086381.1

    Status: PROVISIONAL

    Source sequence(s)
    BC075204
    UniProtKB/Swiss-Prot
    Q6DJH5
    UniProtKB/TrEMBL
    A0A1L8EV54, A0A974BZA0
    Related
    ENSXLAP00005047388.1, ENSXLAT00005048492.1
    Conserved Domains (1) summary
    pfam10209
    Location:8 → 126
    DUF2340; Uncharacterized conserved protein (DUF2340)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    55707961..55729963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041575652.1 → XP_041431586.1  UPF0538 protein C2orf76 homolog isoform X1

    UniProtKB/Swiss-Prot
    Q6DJH5
    UniProtKB/TrEMBL
    A0A1L8EV54, A0A974BZA0
    Conserved Domains (1) summary
    pfam10209
    Location:8 → 126
    DUF2340; Uncharacterized conserved protein (DUF2340)

  2. XM_041575651.1 → XP_041431585.1  UPF0538 protein C2orf76 homolog isoform X1

    UniProtKB/Swiss-Prot
    Q6DJH5
    UniProtKB/TrEMBL
    A0A1L8EV54, A0A974BZA0
    Conserved Domains (1) summary
    pfam10209
    Location:8 → 126
    DUF2340; Uncharacterized conserved protein (DUF2340)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6DJH5.1 GenPept UniProtKB/Swiss-Prot:Q6DJH5

Gene LinkOut

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