pinx1.L PIN2 (TERF1) interacting telomerase inhibitor 1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: pinx1.L
Official Full Name: PIN2 (TERF1) interacting telomerase inhibitor 1 L homeolog
Primary source: Xenbase:XB-GENE-6254357
Locus tag: XELAEV_18028241mg
See related: EnsemblRapid:ENSXLAG00005009896
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: Gno1; Pxr1; lptl; lpts; pinx1
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Genomic context

Location:: chromosome: 5L

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	5L	NC_054379.1 (162748975..162839234)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	5L	NC_030732.1 (151707358..151798104)

Chromosome 5L - NC_054379.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info
enables telomerase inhibitor activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleolus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: PIN2 (TERF1) interacting telomerase inhibitor 1 L homeolog

Names: PIN2-interacting protein 1; pin2/trf1-interacting protein 1; shelterin accessory factor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001092897.1 → NP_001086366.1 PIN2 (TERF1) interacting telomerase inhibitor 1 L homeolog

See identical proteins and their annotated locations for NP_001086366.1

Status: PROVISIONAL

Source sequence(s)

BC075168

UniProtKB/TrEMBL

A0A974HKX7, Q6DJK8

Related

ENSXLAP00005029096.1, ENSXLAT00005029836.1

Conserved Domains (1) summary

smart00443
Location:25 → 70

G_patch; glycine rich nucleic binding domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

162748975..162839234

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041562201.1 → XP_041418135.1 PIN2 (TERF1) interacting telomerase inhibitor 1 L homeolog isoform X1

UniProtKB/TrEMBL

A0A8J1KLF2

Related

ENSXLAP00005029083.1, ENSXLAT00005029823.1

Conserved Domains (1) summary

smart00443
Location:1 → 37

G_patch; glycine rich nucleic binding domain