U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

slc13a3.L solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444773, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
slc13a3.L
Official Full Name
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 L homeolog
Primary source
Xenbase:XB-GENE-5765086
Locus tag
XELAEV_180433841mg
See related
EnsemblRapid:ENSXLAG00005036644
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
nadc3; sdct2; slc13a3
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 9_10L
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (7777982..7848496)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (7752012..7821633)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene transcription factor B1, mitochondrial L homeolog Neighboring gene cartilage associated protein L homeolog Neighboring gene DNA-dependent metalloprotease SPRTN-like Neighboring gene uncharacterized LOC121397866 Neighboring gene uncharacterized LOC108700870 Neighboring gene osteoclast stimulatory transmembrane protein L homeolog Neighboring gene uncharacterized LOC121397867

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Functional characterization of high-affinity Na(+)/dicarboxylate cotransporter found in Xenopus laevis kidney and heart. Oshiro N, et al. Am J Physiol Cell Physiol, 2005 Nov. PMID 15944208
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Clone Names

  • MGC81935

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables solute:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
  
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within sodium ion transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 L homeolog
Names
high-affinity Na/dicarboxylate cotransporter

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092875.1 → NP_001086344.1  solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 L homeolog

    See identical proteins and their annotated locations for NP_001086344.1

    Status: PROVISIONAL

    Source sequence(s)
    BC075138
    UniProtKB/TrEMBL
    Q6DJN7
    Related
    ENSXLAP00005109783.1, ENSXLAT00005111985.1
    Conserved Domains (2) summary
    COG0471
    Location:14 → 567
    CitT; Di- and tricarboxylate transporter [Carbohydrate transport and metabolism]
    cl21473
    Location:9 → 567
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    7777982..7848496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018234403.2 → XP_018089892.1  solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 L homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J0TT84
    Related
    ENSXLAP00005109792.1, ENSXLAT00005111994.1

  2. XM_041575650.1 → XP_041431584.1  solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1LQQ3
    Related
    ENSXLAP00005109785.1, ENSXLAT00005111987.1
    Conserved Domains (1) summary
    cl21473
    Location:9 → 566
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.