U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

psmd9.L proteasome 26S subunit, non-ATPase 9 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444742, updated on 18-Sep-2024

Summary

Official Symbol
psmd9.L
Official Full Name
proteasome 26S subunit, non-ATPase 9 L homeolog
Primary source
Xenbase:XB-GENE-5727812
Locus tag
XELAEV_18007817mg
See related
EnsemblRapid:ENSXLAG00005035907
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
psmd9
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See psmd9.L in Genome Data Viewer
Location:
chromosome: 1L
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (175916665..175926005, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (162763726..162773126, complement)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene BCL7A, BAF complex component L homeolog Neighboring gene cilia and flagella associated protein 251 L homeolog Neighboring gene 4-hydroxyphenylpyruvate dioxygenase L homeolog Neighboring gene SET domain containing 1B L homeolog

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC84770

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within proteasome regulatory particle assembly IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
part_of proteasome complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
proteasome 26S subunit, non-ATPase 9 L homeolog
Names
proteasome (prosome, macropain) 26S subunit, non-ATPase, 9

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092844.1NP_001086313.1  proteasome 26S subunit, non-ATPase 9 L homeolog

    See identical proteins and their annotated locations for NP_001086313.1

    Status: PROVISIONAL

    Source sequence(s)
    BC074472
    UniProtKB/TrEMBL
    A0A974E2M7, Q6GLK7
    Conserved Domains (1) summary
    cd00136
    Location:121178
    PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    175916665..175926005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018245764.1XP_018101253.1  proteasome 26S subunit, non-ATPase 9 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0UD69
    Related
    ENSXLAP00005107339.1, ENSXLAT00005109465.1