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nfe2l2.S NFE2 like bZIP transcription factor 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444736, updated on 18-Sep-2024

Summary

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Official Symbol
nfe2l2.S
Official Full Name
NFE2 like bZIP transcription factor 2 S homeolog
Primary source
Xenbase:XB-GENE-943932
Locus tag
XELAEV_18047193mg
See related
EnsemblRapid:ENSXLAG00005026147
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
NRF2; HEBP1; NF-E2; Nrf-2; IMDDHH; nfe2l2; NF-E2R2
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Genomic context

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See nfe2l2.S in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (68284187..68297545)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (61627093..61640535)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 11A S homeolog Neighboring gene alkylglycerone phosphate synthase S homeolog Neighboring gene uncharacterized LOC108703004 Neighboring gene heterogeneous nuclear ribonucleoprotein A3 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC84750

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
  
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to oxidative stress IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of gene expression IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of primary metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
NFE2 like bZIP transcription factor 2 S homeolog; nuclear factor, erythroid 2 like 2 S homeolog
Names
nuclear factor (erythroid-derived 2)-like 2
nuclear factor, erythroid 2-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092838.1 → NP_001086307.1  NFE2 like bZIP transcription factor 2 S homeolog

    See identical proteins and their annotated locations for NP_001086307.1

    Status: PROVISIONAL

    Source sequence(s)
    BC074462
    UniProtKB/TrEMBL
    A0A974H1P4, Q6GLL4
    Related
    ENSXLAP00005077784.1, ENSXLAT00005079375.1
    Conserved Domains (3) summary
    COG5281
    Location:21 → 128
    COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]
    cd14720
    Location:480 → 547
    bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain
    pfam06886
    Location:33 → 73
    TPX2; Targeting protein for Xklp2 (TPX2)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    68284187..68297545
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041577768.1 → XP_041433702.1  nuclear factor, erythroid 2 like 2 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1LVZ8, A0A974H1P4
    Conserved Domains (1) summary
    cd14720
    Location:419 → 486
    bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein Strain
Heading Accession and Version

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