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serpinb5.S serpin peptidase inhibitor, clade B (ovalbumin), member 5 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444699, updated on 4-Nov-2024

Summary

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Official Symbol
serpinb5.S
Official Full Name
serpin peptidase inhibitor, clade B (ovalbumin), member 5 S homeolog
Primary source
Xenbase:XB-GENE-5803019
Locus tag
XELAEV_18033447mg
See related
EnsemblRapid:ENSXLAG00005004404 AllianceGenome:Xenbase:XB-GENE-5803019
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
serpinb5
Summary
Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within negative regulation of endopeptidase activity. Predicted to be located in extracellular space. Orthologous to human SERPINB5 (serpin family B member 5). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See serpinb5.S in Genome Data Viewer
Location:
chromosome: 6S
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6S NC_054382.1 (72257596..72278480)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6S NC_030735.1 (66649159..66670138, complement)

Chromosome 6S - NC_054382.1Genomic Context describing neighboring genes Neighboring gene vacuolar protein sorting 4 homolog B S homeolog Neighboring gene pyrimidine-specific ribonucleoside hydrolase rihA S homeolog Neighboring gene serpin peptidase inhibitor, clade B (ovalbumin), member 10 S homeolog Neighboring gene serpin family B member 1 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC84405

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within negative regulation of endopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
serpin B5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092801.1 → NP_001086270.1  serpin B5

    See identical proteins and their annotated locations for NP_001086270.1

    Status: PROVISIONAL

    Source sequence(s)
    BC074408
    UniProtKB/Swiss-Prot
    Q6GLQ1
    UniProtKB/TrEMBL
    A0A1L8FS92, A0A974CJL7
    Related
    ENSXLAP00005013149.1, ENSXLAT00005013329.1
    Conserved Domains (1) summary
    cd02057
    Location:1 → 375
    serpinB5_maspin; serpin family B member 5, mammary serine proteinase inhibitor

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054382.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    72257596..72278480
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018268708.2 → XP_018124197.1  serpin B5 isoform X1

    UniProtKB/Swiss-Prot
    Q6GLQ1
    UniProtKB/TrEMBL
    A0A1L8FS92, A0A974CJL7
    Conserved Domains (1) summary
    cd02057
    Location:1 → 375
    serpinB5_maspin; serpin family B member 5, mammary serine proteinase inhibitor

  2. XM_041567167.1 → XP_041423101.1  serpin B5 isoform X1

    UniProtKB/Swiss-Prot
    Q6GLQ1
    UniProtKB/TrEMBL
    A0A1L8FS92, A0A974CJL7
    Conserved Domains (1) summary
    cd02057
    Location:1 → 375
    serpinB5_maspin; serpin family B member 5, mammary serine proteinase inhibitor
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GLQ1.1 GenPept UniProtKB/Swiss-Prot:Q6GLQ1

Gene LinkOut

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