rhbdl1.S rhomboid, veinlet-like 1 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: rhbdl1.S
Official Full Name: rhomboid, veinlet-like 1 S homeolog
Primary source: Xenbase:XB-GENE-953356
Locus tag: XELAEV_18047821mg
See related: EnsemblRapid:ENSXLAG00005009327 AllianceGenome:Xenbase:XB-GENE-953356
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: rrp; rhbdl; rhbdl1; rhbdl1.L
Summary: Predicted to enable serine-type endopeptidase activity. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 9_10S

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	9_10S	NC_054388.1 (107185160..107207970, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	9_10S	NC_030741.1 (100546767..100569775, complement)

Chromosome 9_10S - NC_054388.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables serine-type endopeptidase activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: rhomboid, veinlet-like 1 S homeolog

Names: rhomboid, veinlet-like 1 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001092742.1 → NP_001086211.1 rhomboid, veinlet-like 1 S homeolog

See identical proteins and their annotated locations for NP_001086211.1

Status: PROVISIONAL

Source sequence(s)

BC074330

UniProtKB/TrEMBL

A0A974BVX1, Q6GLW6

Related

ENSXLAP00005027191.1, ENSXLAT00005027923.1

Conserved Domains (1) summary

pfam01694
Location:173 → 327

Rhomboid; Rhomboid family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

107185160..107207970 complement

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GenBank, FASTA, Sequence Viewer (Graphics)