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gnpat.L glyceronephosphate O-acyltransferase L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444573, updated on 4-Nov-2024

Summary

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Official Symbol
gnpat.L
Official Full Name
glyceronephosphate O-acyltransferase L homeolog
Primary source
Xenbase:XB-GENE-17332960
Locus tag
XELAEV_18026766mg
See related
EnsemblRapid:ENSXLAG00005015547 AllianceGenome:Xenbase:XB-GENE-17332960
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
dhapat
Summary
Human ortholog(s) of this gene implicated in rhizomelic chondrodysplasia punctata type 2. Orthologous to human GNPAT (glyceronephosphate O-acyltransferase). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See gnpat.L in Genome Data Viewer
Location:
chromosome: 5L
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (51092688..51116581)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (49913894..49955627)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 67 L homeolog Neighboring gene 40S small subunit processome assembly factor 1 L homeolog Neighboring gene uncharacterized LOC108716321 Neighboring gene delta-like 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC84007

General protein information

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Preferred Names
uncharacterized protein LOC444573

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092675.1 → NP_001086144.1  uncharacterized protein LOC444573

    See identical proteins and their annotated locations for NP_001086144.1

    Status: PREDICTED

    Source sequence(s)
    BC074254
    UniProtKB/TrEMBL
    A0A974CQW9, Q6GM34
    Related
    ENSXLAP00005045671.1, ENSXLAT00005046770.1
    Conserved Domains (1) summary
    cd07993
    Location:117 → 321
    LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    51092688..51116581
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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