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lsm7.L LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444555, updated on 17-Aug-2024

Summary

Official Symbol
lsm7.L
Official Full Name
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated L homeolog
Primary source
Xenbase:XB-GENE-1008127
Locus tag
XELAEV_18006068mg
See related
EnsemblRapid:ENSXLAG00005021195
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
lsm7; GC83430
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Genomic context

Location:
chromosome: 1L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (99847875..99864142, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (88211344..88227611, complement)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene actin cytoskeleton-regulatory complex protein PAN1-like Neighboring gene uncharacterized LOC121393185 Neighboring gene signal peptide peptidase like 2B L homeolog Neighboring gene transmembrane serine protease 9 L homeolog

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated L homeolog
Names
LSM7 homolog, U6 small nuclear RNA associated

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092657.1NP_001086126.1  LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated L homeolog

    See identical proteins and their annotated locations for NP_001086126.1

    Status: PROVISIONAL

    Source sequence(s)
    BC074231
    UniProtKB/TrEMBL
    A0A974DSX7, A0A974DYM5, Q6DKD2
    Related
    ENSXLAP00005062205.1, ENSXLAT00005063658.1
    Conserved Domains (1) summary
    cd01729
    Location:997
    LSm7; Like-Sm protein 7

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    99847875..99864142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)