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cse1l.L CSE1 chromosome segregation 1-like L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444464, updated on 17-Aug-2024

Summary

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Official Symbol
cse1l.L
Official Full Name
CSE1 chromosome segregation 1-like L homeolog
Primary source
Xenbase:XB-GENE-5802416
Locus tag
XELAEV_18043403mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
xpo2; cse1l; cse1l.S
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Genomic context

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See cse1l.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
27
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (8518420..8557148, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (8506413..8545592, complement)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene retinol dehydrogenase 20 L homeolog Neighboring gene staufen double-stranded RNA binding protein 1 L homeolog Neighboring gene ADP ribosylation factor guanine nucleotide exchange factor 2 L homeolog Neighboring gene protein kinase (cAMP-dependent, catalytic) inhibitor gamma L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Protein interactomes of protein phosphatase 2A B55 regulatory subunits reveal B55-mediated regulation of replication protein A under replication stress. Wang F, et al. Sci Rep, 2018 Feb 8. PMID 29422626, Free PMC Article
  2. Two distinct modes of DNMT1 recruitment ensure stable maintenance DNA methylation. Nishiyama A, et al. Nat Commun, 2020 Mar 6. PMID 32144273, Free PMC Article
  3. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Clone Names

  • MGC84554

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables nuclear export signal receptor activity IEA
Inferred from Electronic Annotation
more info
  
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within intracellular protein transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein export from nucleus IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein import into nucleus IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytosol IEA
Inferred from Electronic Annotation
more info
  
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
exportin-2
Names
CSE1 chromosome segregation 1-like S homeolog
chromosome segregation 1-like protein
exp2
importin-alpha re-exporter

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092566.1 → NP_001086035.1  exportin-2

    See identical proteins and their annotated locations for NP_001086035.1

    Status: PROVISIONAL

    Source sequence(s)
    BC073735
    UniProtKB/Swiss-Prot
    Q6GMY9
    UniProtKB/TrEMBL
    A0A974BXB2
    Conserved Domains (3) summary
    smart00913
    Location:29 → 102
    IBN_N; Importin-beta N-terminal domain
    pfam03378
    Location:527 → 962
    CAS_CSE1; CAS/CSE protein, C-terminus
    pfam08506
    Location:156 → 525
    Cse1; Cse1

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    8518420..8557148 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018234370.2 → XP_018089859.1  exportin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8J0TJH0, A0A974BXB2
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GMY9.1 GenPept UniProtKB/Swiss-Prot:Q6GMY9

Gene LinkOut

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