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acat1.S acetyl-CoA acetyltransferase 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444457, updated on 17-Aug-2024

Summary

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Official Symbol
acat1.S
Official Full Name
acetyl-CoA acetyltransferase 1 S homeolog
Primary source
Xenbase:XB-GENE-17333679
Locus tag
XELAEV_18016290mg
See related
EnsemblRapid:ENSXLAG00005020285
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
acat1-B
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Genomic context

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See acat1.S in Genome Data Viewer
Location:
chromosome: 2S
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (152867979..152882671)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (143854061..143868753)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene pannexin-1-like Neighboring gene cullin 5 S homeolog Neighboring gene nuclear protein, ataxia-telangiectasia locus S homeolog Neighboring gene exophilin 5 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC83664

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables acetyl-CoA C-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables acetyl-CoA C-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
acetyl-CoA acetyltransferase B, mitochondrial
Names
Acetoacetyl-CoA thiolase B
NP_001086028.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092559.1 → NP_001086028.1  acetyl-CoA acetyltransferase B, mitochondrial precursor

    See identical proteins and their annotated locations for NP_001086028.1

    Status: PROVISIONAL

    Source sequence(s)
    BC073720
    UniProtKB/Swiss-Prot
    Q6GN02
    UniProtKB/TrEMBL
    A0A974DL67
    Related
    ENSXLAP00005059425.1, ENSXLAT00005060874.1
    Conserved Domains (2) summary
    PLN02644
    Location:34 → 420
    PLN02644; acetyl-CoA C-acetyltransferase
    cd00751
    Location:36 → 419
    thiolase; Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    152867979..152882671
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GN02.1 GenPept UniProtKB/Swiss-Prot:Q6GN02

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials