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tspan15.L tetraspanin 15 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444405, updated on 17-Aug-2024

Summary

Official Symbol
tspan15.L
Official Full Name
tetraspanin 15 L homeolog
Primary source
Xenbase:XB-GENE-5960467
Locus tag
XELAEV_18039378mg
See related
EnsemblRapid:ENSXLAG00005035163
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tspan15
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Genomic context

Location:
chromosome: 8L
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (71731828..71748338)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (58243369..58259896)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene ryanodine receptor 1 (skeletal) L homeolog Neighboring gene mitogen-activated protein kinase kinase kinase kinase 1 Neighboring gene eukaryotic translation initiation factor 3 subunit K L homeolog Neighboring gene CAP-Gly domain containing linker protein 3 L homeolog

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092507.1NP_001085976.1  tetraspanin 15 L homeolog

    See identical proteins and their annotated locations for NP_001085976.1

    Status: PROVISIONAL

    Source sequence(s)
    BC073635
    UniProtKB/TrEMBL
    A0A974C7Y3, Q6GN81
    Related
    ENSXLAP00005105197.1, ENSXLAT00005107245.1
    Conserved Domains (2) summary
    cd03158
    Location:111228
    penumbra_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), penumbra_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:16256
    Tetraspannin; Tetraspanin family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    71731828..71748338
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)