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rpl30.L ribosomal protein L30 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444364, updated on 4-Nov-2024

Summary

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Official Symbol
rpl30.L
Official Full Name
ribosomal protein L30 L homeolog
Primary source
Xenbase:XB-GENE-6255385
Locus tag
XELAEV_18032230mg
See related
EnsemblRapid:ENSXLAG00005026704 AllianceGenome:Xenbase:XB-GENE-6255385
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
l30; rpl30-a; rpl30-b
Summary
Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in herpes simplex. Orthologous to human RPL30 (ribosomal protein L30). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See rpl30.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (139599628..139605836)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (130408988..130415197)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene glutamate-rich protein 5 like L homeolog Neighboring gene myb-related transcription factor, partner of profilin-like Neighboring gene small nucleolar RNA SNORA72 Neighboring gene matrilin 2 L homeolog Neighboring gene lysosomal protein transmembrane 4 beta L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene expression screening in Xenopus identifies molecular pathways, predicts gene function and provides a global view of embryonic patterning. Gawantka V, et al. Mech Dev, 1998 Oct. PMID 9831640
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC82844

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ribosomal protein L30 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092466.1 → NP_001085935.1  ribosomal protein L30 L homeolog

    See identical proteins and their annotated locations for NP_001085935.1

    Status: PROVISIONAL

    Source sequence(s)
    BC073560
    UniProtKB/TrEMBL
    A0A974HGE1, Q6GNF2
    Related
    ENSXLAP00005079468.1, ENSXLAT00005081059.1
    Conserved Domains (1) summary
    PTZ00106
    Location:2 → 107
    PTZ00106; 60S ribosomal protein L30; Provisional

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    139599628..139605836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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