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bccip.L BRCA2 and CDKN1A interacting protein L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 444344, updated on 2-May-2024

Summary

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Official Symbol
bccip.L
Official Full Name
BRCA2 and CDKN1A interacting protein L homeolog
Primary source
Xenbase:XB-GENE-866129
Locus tag
XELAEV_18034588mg
See related
EnsemblRapid:ENSXLAG00005011930
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
bccip
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Genomic context

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See bccip.L in Genome Data Viewer
Location:
chromosome: 7L
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (19766609..19786318, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (19810595..19830305, complement)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase domain 12 L homeolog Neighboring gene fibronectin type III and ankyrin repeat domains 1 L homeolog Neighboring gene DEAH-box helicase 32 (putative) L homeolog Neighboring gene uroporphyrinogen III synthase L homeolog Neighboring gene matrix metallopeptidase 21 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC82792

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within DNA repair IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within microtubule anchoring ISS
Inferred from Sequence or Structural Similarity
more info
  
acts_upstream_of_or_within microtubule cytoskeleton organization ISS
Inferred from Sequence or Structural Similarity
more info
  
acts_upstream_of_or_within mitotic spindle assembly ISS
Inferred from Sequence or Structural Similarity
more info
  
acts_upstream_of_or_within mitotic spindle organization ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
  
located_in centriole ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in centrosome ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in mitotic spindle pole ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in spindle pole IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
protein BCCIP homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001092448.1 → NP_001085917.1  protein BCCIP homolog

    See identical proteins and their annotated locations for NP_001085917.1

    Status: PROVISIONAL

    Source sequence(s)
    BC073531
    UniProtKB/Swiss-Prot
    Q6GNI0
    UniProtKB/TrEMBL
    A0A974CE64
    Related
    ENSXLAP00005034988.1, ENSXLAT00005035871.1
    Conserved Domains (1) summary
    pfam13862
    Location:52 → 250
    BCIP; p21-C-terminal region-binding protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    19766609..19786318 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GNI0.1 GenPept UniProtKB/Swiss-Prot:Q6GNI0

Gene LinkOut

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