dnai1.L dynein, axonemal, intermediate chain 1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: dnai1.L
Official Full Name: dynein, axonemal, intermediate chain 1 L homeolog
Primary source: Xenbase:XB-GENE-6255407
Locus tag: XELAEV_18008622mg
See related: EnsemblRapid:ENSXLAG00005001183
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: dic; ics; pcd; ics1; cild1; dnai1
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Genomic context

Location:: chromosome: 1L

Exon count:: 21

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1L	NC_054371.1 (232766616..232806597, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1L	NC_030724.1 (219058414..219099710, complement)

Chromosome 1L - NC_054371.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables dynein heavy chain binding	IEA Inferred from Electronic Annotation more info
enables dynein light chain binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within cilium movement	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within outer dynein arm assembly	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of outer dynein arm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: dynein, axonemal, intermediate chain 1 L homeolog

Names: cytoplasmic dynein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001092408.1 → NP_001085877.1 dynein, axonemal, intermediate chain 1 L homeolog

See identical proteins and their annotated locations for NP_001085877.1

Status: PROVISIONAL

Source sequence(s)

BC073463

UniProtKB/TrEMBL

Q6GNP1

Related

ENSXLAP00005003610.1, ENSXLAT00005003672.1

Conserved Domains (3) summary

COG2319
Location:318 → 668

WD40; WD40 repeat [General function prediction only]

sd00039
Location:325 → 370

7WD40; WD40 repeat [structural motif]

cl02567
Location:343 → 601

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

232766616..232806597 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_018245356.2 → XP_018100845.1 dynein, axonemal, intermediate chain 1 L homeolog isoform X1

UniProtKB/TrEMBL

A0A1L8I3C7, A0A974E2Z4
XM_018245350.2 → XP_018100839.1 dynein, axonemal, intermediate chain 1 L homeolog isoform X1

UniProtKB/TrEMBL

A0A1L8I3C7, A0A974E2Z4