snx22.L sorting nexin 22 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: snx22.L
Official Full Name: sorting nexin 22 L homeolog
Primary source: Xenbase:XB-GENE-17340049
Locus tag: XELAEV_18018085mg
See related: EnsemblRapid:ENSXLAG00005036331 AllianceGenome:Xenbase:XB-GENE-17340049
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary: Predicted to enable phosphatidylinositol phosphate binding activity. Predicted to be located in membrane. Orthologous to human SNX22 (sorting nexin 22). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 3L

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	3L	NC_054375.1 (100044901..100069193, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	3L	NC_030728.1 (84738499..84762902, complement)

Chromosome 3L - NC_054375.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables phosphatidylinositol binding	IEA Inferred from Electronic Annotation more info
enables phosphatidylinositol phosphate binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: sorting nexin 22 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001092350.1 → NP_001085819.1 sorting nexin 22 L homeolog

See identical proteins and their annotated locations for NP_001085819.1

Status: PROVISIONAL

Source sequence(s)

BC073389

UniProtKB/TrEMBL

A0A974HT82, Q6GNW2

Related

ENSXLAP00005108698.1, ENSXLAT00005110862.1

Conserved Domains (1) summary

cd06880
Location:2 → 113

PX_SNX22; The phosphoinositide binding Phox Homology domain of Sorting Nexin 22

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

100044901..100069193 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_018250948.2 → XP_018106437.1 sorting nexin 22 L homeolog isoform X2

UniProtKB/TrEMBL

A0A8J0UNG0, A0A974HT82
XM_041585082.1 → XP_041441016.1 sorting nexin 22 L homeolog isoform X1

UniProtKB/TrEMBL

A0A8J1MI05, A0A974HT82

Related

ENSXLAP00005108700.1, ENSXLAT00005110864.1

Conserved Domains (1) summary

cd06880
Location:2 → 113

PX_SNX22; The phosphoinositide binding Phox Homology domain of Sorting Nexin 22