tmem39a.L transmembrane protein 39A L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: tmem39a.L
Official Full Name: transmembrane protein 39A L homeolog
Primary source: Xenbase:XB-GENE-6255703
Locus tag: XELAEV_18011321mg
See related: EnsemblRapid:ENSXLAG00005031936 AllianceGenome:Xenbase:XB-GENE-6255703
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: tmem39a; tmem39a-a; tmem39a-b
Summary: Predicted to act upstream of or within negative regulation of autophagosome assembly and negative regulation of autophagosome maturation. Predicted to be located in endoplasmic reticulum membrane. Orthologous to human TMEM39A (transmembrane protein 39A). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 2L

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2L	NC_054373.1 (6225269..6247488)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2L	NC_030726.1 (6028191..6049781)

Chromosome 2L - NC_054373.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within negative regulation of autophagosome assembly	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within negative regulation of autophagosome maturation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in endoplasmic reticulum membrane	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: transmembrane protein 39A-B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.